CDS
| Accession Number | TCMCG066C09137 |
| gbkey | CDS |
| Protein Id | XP_034580434.1 |
| Location | complement(join(45716791..45717237,45717329..45717577,45718146..45718346,45718733..45718903,45718993..45719177,45719264..45719589,45720156..45721363)) |
| Gene | LOC117843827 |
| GeneID | 117843827 |
| Organism | Setaria viridis |
Protein
| Length | 928aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034724543.1 |
| Definition | pre-mRNA-splicing factor SYF1 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Pre-mRNA-splicing factor |
| KEGG_TC | - |
| KEGG_Module |
M00355
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12867
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03040
[VIEW IN KEGG] map03040 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGCCGTCGGCGGCGGGTCCGGTGGCTGTGGCGTCGGCGTCGGCGGCGGCAAAGGCCGCGGCCACCCCGGCCGTCGGAATCTCGCCGGAGCTGTACCCGTCCGAGGACGACTTGCCCTACGAGGAGGAGATCCTCCGGGAGCCGTTCAAGCTCAAGGGGTGGTGGCGCTACCTCGTCGCGCGCGCCGCCGCGCCGTTCTCCAAGCGCGCCGTCATCTACGAGCGCGCGCTCAAGGCGCTCCCGGGGAGCTACAAGCTCTGGCACGCCTACCTCCGCGAGCGCCTCGACCACGCGCGCCCCCACCCCATCGACCACCCGGCCTACTCGTCGCTCAACAACACCTTCGAGCGTGCGCTGGCGACGATGCACAAGATGCCGCGCATCTGGGTCCTCTACCTCACGTCGCTCCTCGACCAGCGCCTGCTCACGCGCTCGCGCCGCGCCTTCGACCGCGCCCTGCGCGCGCTGCCGGTGACGCAGCACGACCGCATCTGGCCGCTGTACCTGCGCCTCGCGTCGCTCCCGGCCTGCCCGGTCGAGACGTCGCTCCGGGTGTTCCGCCGCTACCTCCAGTTCGACCCCTCCCACGCAGAGGATTTCATCAATTTCCTCATAACTGCAAACCGCTGGCAAGAGGCTGCTGACCGACTGGCTTCCGTGCTCAATGATGATGGCTTCCGCTCTGTCAAGGGGAAGACCAGGCACCAGCTCTGGCTCGAGCTCTGCGAGATCCTCACCAAGCATGCTGATGAGGTTGCTGGCCTCAAGGTGGACGCCATCCTGCGGGGTGGGATTCGGAAGTTCACAGACGAGGTTGGCAAGCTTTGGACCTCGCTGGCTGATTACTATGTCAGGAGAGGCCTTTTCGAAAAAGCTAGAGATGTATTTGAGGAGGGTGTTTCATCGGTTGTTACCGTGAAGGAGTTCAGCGTGGTGTTTGAGGCATATACACAGTTTGAGCAGAGTATGCTTGCAGCAAAGCTGGAGGCTGCCGAGGAAGAAGGGGCTGAGGATGAGGATGAGGGAGGGAGCAGGAAAAATGGGATGGATAAACTATCGAAGAAATTCCTCGAGGAATTCTGGTTGAACGATGAGGACGATACTGATTTGAGGATGGCAAGGTTTGAGCGGCTGTTGGATCGCAGACCAGAGCTTCTTAGCAGTGTGCTGTTGCGACAGAACCCACACAACGTGGAGGAGTGGCACAGGAGGGTGAAACTTTTTGAGAAGGATCCTGCAAGGCAAGTAGCGACCTATGTTGAGGCCGTGAAAACCGTGGACCCAATGAAAGCAGTTGGGAAACCCCATACTCTATGGGTAGCATTTGCAAAGATGTATGAGAAACACAGTCGTCTAGATAGTGCTGAAGATATCTTCAAACGGGCTACTCAAGTGAATTATAAGGCAGTTGACCACTTAGCCAGTATCTGGTGTGAATGGGCGGAAATGGAGCTGCGACACAGCAATTTTGACAAGGCTATTGAGCTGATGAGGCAAGCAACAGCAGAGCCCTCTGTCGAGGTTAAACGGCGAGCTGCTGCTGAGGGGAACGAACCTGTCCAAATGAAAGTACACAAATCTTTGAAACTGTGGAGCTTTTACGTTGATCTGGAGGAGAGCCTTGGAACCTTGGACTCTACCCGTGCCGTTTATGAGAGAATATTGGATTTACGAATTGCTACTCCTCAGATAATACTCAATTATGCATATCTTCTTGAGGAGCACAGGTATTTTGAAGATGCATTTAAAGTGTATGAAAGGGGCGTGAAAATATTCAAGTATCCCCATGTTAAGGCCATCTGGGTGACCTACCTTACAAAGTTTGTACAGAGATACAAGAGAAGCAAGTTAGAACGAGCAAGAGAGCTTTTCCATGAAGCTGTCCAACAGGCTCCTCCAGATGAAAAGAAGCCCCTATATTTACAATGGGCCAAACTGGAGGAAGACTATGGTCTTGCAAAACGTGCTATGAATGTTTATGATGAAGCTGTAAGGGCTGTTCCTAACAGTGAAAAAATGGCCATGTATGAAATCTATATAGCACGTGCTGCTGAGCTGTTCGGCGTTCCAAGGACAAGACAAATATACGAGCAAGCAATTGAATCTGGGCTCCCAGACAGAGATGTTCTGACAATGTGCATGAAATTTGCTGAGCTAGAAAGAAGCCTTGGAGAAATTGACCGCTCGCGTGCTATCTATGTGCACGCATCCAACTATGCTGATCCAAACAATTCTGACTTTTGGAAGAAGTGGAATGACTTTGAGATCCAGCATGGTAACGAAGACACTTTTAGGGAGATGCTTCGTATCAAACGTACAGTGGCTGCTAGTCGCAGTCAGACACATTTCATACTACCGGAGTACTTGATGCAGAGGGATCAGAGGCTAAACCTGGATGAGGCAGTCGACACTCTGAAGCGTGCTGGCGTTCCTGAGGACGAGATGGCAGCCTTGGAAAGGCAACTAGCTCCTGGACCATCCACAGCACCTTCTGCAGCGCAAAGCACTGCCCCAGCCTCCGCTAACAGGATGATGAGCTTTGTCAGTGCTGGAGTAGAGGCGCAGGCTGAGAGCAGCAGGCAACAAGCTGGTAACAATGAGGATATTGAGCTGCCCGATGAGAGCGACGACGAGGAGCCGGATGTACAAATTGCAGAGAAGAGTGTTCCAGCTGCTGTGTTTGGCGAGCTCGGCAAGAGAGCCGCTGAGAGCCAGGAGGAAAGCTCTGGTGCCCAAGAGAATGAGCAGCTGGGTGCCCTTGAGAGGATAAAGAGACGGCGTCAATAG |
| Protein: MPSAAGPVAVASASAAAKAAATPAVGISPELYPSEDDLPYEEEILREPFKLKGWWRYLVARAAAPFSKRAVIYERALKALPGSYKLWHAYLRERLDHARPHPIDHPAYSSLNNTFERALATMHKMPRIWVLYLTSLLDQRLLTRSRRAFDRALRALPVTQHDRIWPLYLRLASLPACPVETSLRVFRRYLQFDPSHAEDFINFLITANRWQEAADRLASVLNDDGFRSVKGKTRHQLWLELCEILTKHADEVAGLKVDAILRGGIRKFTDEVGKLWTSLADYYVRRGLFEKARDVFEEGVSSVVTVKEFSVVFEAYTQFEQSMLAAKLEAAEEEGAEDEDEGGSRKNGMDKLSKKFLEEFWLNDEDDTDLRMARFERLLDRRPELLSSVLLRQNPHNVEEWHRRVKLFEKDPARQVATYVEAVKTVDPMKAVGKPHTLWVAFAKMYEKHSRLDSAEDIFKRATQVNYKAVDHLASIWCEWAEMELRHSNFDKAIELMRQATAEPSVEVKRRAAAEGNEPVQMKVHKSLKLWSFYVDLEESLGTLDSTRAVYERILDLRIATPQIILNYAYLLEEHRYFEDAFKVYERGVKIFKYPHVKAIWVTYLTKFVQRYKRSKLERARELFHEAVQQAPPDEKKPLYLQWAKLEEDYGLAKRAMNVYDEAVRAVPNSEKMAMYEIYIARAAELFGVPRTRQIYEQAIESGLPDRDVLTMCMKFAELERSLGEIDRSRAIYVHASNYADPNNSDFWKKWNDFEIQHGNEDTFREMLRIKRTVAASRSQTHFILPEYLMQRDQRLNLDEAVDTLKRAGVPEDEMAALERQLAPGPSTAPSAAQSTAPASANRMMSFVSAGVEAQAESSRQQAGNNEDIELPDESDDEEPDVQIAEKSVPAAVFGELGKRAAESQEESSGAQENEQLGALERIKRRRQ |